STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_1053KEGG: L-cystine transport system permease TcyL; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit. (218 aa)    
Predicted Functional Partners:
Bccel_1052
Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: glnQ3, glutamine ABC transport system ATP-binding protein GlnQ3; SMART: AAA ATPase.
 0.999
Bccel_1054
KEGG: family 3 extracellular solute-binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3; Belongs to the bacterial solute-binding protein 3 family.
 0.997
lolD
Phosphonate-transporting ATPase; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 
 
 0.932
Bccel_3698
Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: antimicrobial peptide ABC transporter ATPase; SMART: AAA ATPase.
 
 
 
 0.932
Bccel_1044
Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase.
 
 
 
 0.930
Bccel_4702
Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: antimicrobial peptide ABC transporter ATPase; SMART: AAA ATPase.
 
 
 
 0.930
Bccel_5608
Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase.
 
 
 
 0.930
Bccel_4266
Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: hypothetical protein; SMART: AAA ATPase.
 
 
 
 0.929
Bccel_0891
Fe(3+)-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase.
 
 
 
 0.921
Bccel_4221
Sulfate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter ATP-binding protein; SMART: AAA ATPase.
 
 
 
 0.920
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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