STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_1100TIGRFAM: amino acid adenylation domain protein; KEGG: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase, Thioesterase, type IV pilus assembly PilZ, condensation domain protein, acyl carrier protein familyprotein; Belongs to the ATP-dependent AMP-binding enzyme family. (1876 aa)    
Predicted Functional Partners:
Bccel_1479
6-deoxyerythronolide-B synthase; PFAM: KR domain protein, acyl carrier protein familyprotein, Beta-ketoacyl synthase, Acyl transferase; KEGG: polyketide synthase family protein; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase/Fatty acid synthase, KR, Polyketide synthase, acyl transferase domain-containing protein.
 
 0.999
Bccel_1682
KEGG: thioester reductase; TIGRFAM: thioester reductase domain protein; PFAM: Male sterility domain-containing protein.
 0.999
Bccel_2229
6-deoxyerythronolide-B synthase, 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Acyl transferase, Beta-ketoacyl synthase, KR domain protein, acyl carrier protein familyprotein; KEGG: polyketide synthase family protein; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase/Fatty acid synthase, KR, Polyketide synthase, acyl transferase domain-containing protein.
 
 0.999
Bccel_0225
6-deoxyerythronolide-B synthase, Phenylalanine racemase (ATP-hydrolyzing); PFAM: Beta-ketoacyl synthase, Uncharacterized protein YobF, acyl carrier protein familyprotein, KR domain protein; KEGG: beta-ketoacyl synthase; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase/Fatty acid synthase, KR.
 0.993
hemL
PFAM: aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; HAMAP : Glutamate-1-semialdehyde 2,1-aminomutase; KEGG: hemL, glutamate-1-semialdehyde aminotransferase.
  
 0.957
Bccel_1699
Glutamate racemase; KEGG: AMP-dependent synthetase and ligase; PFAM: condensation domain protein.
 
0.955
Bccel_4142
PFAM: condensation domain protein, Alcohol acetyltransferase; KEGG: hypothetical protein.
  
 
 0.929
Bccel_0220
Oleoyl-(acyl-carrier-protein) hydrolase; KEGG: putative thioesterase involved in non-ribosomal peptide biosynthesis; PFAM: Thioesterase.
  
 0.927
Bccel_3310
Oleoyl-(acyl-carrier-protein) hydrolase; KEGG: putative thioesterase involved in non-ribosomal peptide biosynthesis; PFAM: Thioesterase.
  
 0.927
Bccel_1701
Oleoyl-(acyl-carrier-protein) hydrolase; KEGG: linear gramicidin dehydrogenase LgrE; PFAM: Thioesterase.
  
 0.926
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.