STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_1103Cellulose 1,4-beta-cellobiosidase; KEGG: putative carbohydrate binding protein,dockerin-like protein; PFAM: glycoside hydrolase family 9, Carbohydrate-binding CenC domain protein. (622 aa)    
Predicted Functional Partners:
Bccel_1102
PFAM: glycoside hydrolase family 9; KEGG: Dockerin domain protein.
     0.950
Bccel_3943
PFAM: glycoside hydrolase family 5; KEGG: endoglucanase.
 
 
 0.817
Bccel_0991
PFAM: glycoside hydrolase family 5; KEGG: glycoside hydrolase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.811
Bccel_0723
PFAM: glycoside hydrolase family 5; KEGG: glycoside hydrolase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 0.803
Bccel_4191
KEGG: glycoside hydrolase family protein; PFAM: glycoside hydrolase family 5, cellulose-binding family II; SMART: Carbohydrate binding domain CBM49, cellulose-binding family II.
 
 
 0.785
Bccel_1280
Cellulase; KEGG: glycoside hydrolase family protein; PFAM: glycoside hydrolase family 9.
  
 0.784
Bccel_2734
PFAM: glycoside hydrolase family 9; KEGG: Dockerin domain protein.
 
     0.783
Bccel_0465
PFAM: glycoside hydrolase family 8; KEGG: lysophospholipase L1-like esterase.
  
  0.775
Bccel_2002
Cellulase; KEGG: dockerin-like protein; PFAM: glycoside hydrolase family 9.
  
 0.771
Bccel_2823
Cellulase; KEGG: dockerin-like protein; PFAM: glycoside hydrolase family 9; Belongs to the glycosyl hydrolase 9 (cellulase E) family.
  
 0.768
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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