STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_1169PFAM: NADPH-dependent FMN reductase; KEGG: acetyltransferase. (186 aa)    
Predicted Functional Partners:
Bccel_1882
PFAM: NADPH-dependent FMN reductase; KEGG: Multimeric flavodoxin WrbA.
  
     0.771
Bccel_3323
PFAM: NADPH-dependent FMN reductase; KEGG: NADPH-dependent FMN reductase.
 
     0.770
Bccel_4715
PFAM: NADPH-dependent FMN reductase; KEGG: multimeric flavodoxin WrbA.
  
     0.684
Bccel_1024
KEGG: hypothetical protein.
 
  
 0.597
Bccel_1170
KEGG: hypothetical protein.
       0.563
Bccel_3164
PFAM: Ferritin Dps family protein; KEGG: ferritin Dps family protein; Belongs to the Dps family.
  
  
 0.551
Bccel_2402
KEGG: putative flavoprotein; PFAM: beta-lactamase domain protein, flavodoxin/nitric oxide synthase; SMART: beta-lactamase domain protein.
 
 
 0.539
Bccel_3937
Hypothetical protein; KEGG: AAA ATPase.
   
  
 0.538
Bccel_0121
PFAM: NADPH-dependent FMN reductase; KEGG: multimeric flavodoxin WrbA.
 
     0.537
Bccel_5582
KEGG: C_GCAxxG_C_C family protein; TIGRFAM: C_GCAxxG_C_C family protein; PFAM: C_GCAxxG_C_C family protein.
 
     0.513
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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