Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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gene co-occurrence
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[Homology]
Score
Bccel_1233PFAM: Cobyrinic acid ac-diamide synthase, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: P-loop ATPase, MinD superfamily; overlaps another CDS with the same product name. (286 aa)    
Predicted Functional Partners:
Bccel_0982
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: NADH:ubiquinone oxidoreductase 24 kD subunit.
   
 0.959
Bccel_1234
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dinitrogenase iron-molybdenum cofactor biosynthesis protein.
 
   
 0.953
Bccel_1231
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: hypothetical protein.
   
 0.944
Bccel_3831
SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Pyruvate/ketoisovalerate oxidoreductase, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein, Transketolase domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein.
    
 0.878
Bccel_1567
SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein, Pyruvate/ketoisovalerate oxidoreductase, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein.
    
 0.857
Bccel_1235
ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
 
   0.847
Bccel_1232
PFAM: Cobyrinic acid ac-diamide synthase, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: cobyrinic acid ac-diamide synthase; overlaps another CDS with the same product name.
 
    
0.845
Bccel_2280
TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein, NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein, iron hydrogenase small subunit, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: hydrogenase, Fe-only; SMART: iron hydrogenase small subunit, NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein.
   
 0.845
Bccel_4070
Hydrogenase, Fe-only; SMART: iron hydrogenase small subunit, NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein; TIGRFAM: hydrogenase, Fe-only; KEGG: hymC, putative iron-only hydrogenase, catalytic subunit HymC; PFAM: hydrogenase large subunit domain protein, iron hydrogenase small subunit, NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
   
 0.845
Bccel_3490
KEGG: glutamate synthase family protein; PFAM: ferredoxin-dependent glutamate synthase, glutamine amidotransferase class-II, glutamate synthase alpha subunit domain protein, glutamate synthase.
    
 0.829
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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