STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_1246PFAM: copper amine oxidase-like domain-containing protein; KEGG: hypothetical protein. (796 aa)    
Predicted Functional Partners:
Bccel_4964
PFAM: S-layer domain-containing protein; KEGG: S-layer protein; overlaps another CDS with the same product name.
  
  
  0.802
Bccel_1871
PFAM: S-layer domain-containing protein, Putative glycoside hydrolase xylanase; KEGG: putative S-layer protein.
  
  
  0.799
Bccel_1928
PFAM: S-layer domain-containing protein; KEGG: S-layer protein.
  
  
  0.799
Bccel_2819
PFAM: S-layer domain-containing protein; KEGG: S-layer protein.
  
  
  0.798
Bccel_1367
PFAM: S-layer domain-containing protein, Cadherin-like beta sandwich domain, APHP domain protein; KEGG: Ig domain-containing protein.
  
  
  0.797
Bccel_1767
PFAM: S-layer domain-containing protein; KEGG: S-layer-like domain-containing protein.
  
  
  0.796
Bccel_3559
PFAM: copper amine oxidase-like domain-containing protein; KEGG: polymorphic outer membrane protein.
  
  
  0.793
Bccel_4837
PFAM: S-layer domain-containing protein; KEGG: S-layer-like domain-containing protein.
  
  
  0.792
Bccel_0608
PFAM: S-layer domain-containing protein; KEGG: hypothetical protein.
  
  
  0.791
Bccel_5381
PFAM: S-layer domain-containing protein, Leucine rich repeat 4, EF-Hand domain protein; KEGG: putative surface layer protein.
  
  
  0.791
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.