STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_1330Cellulase; PFAM: glycoside hydrolase family 9, type 3a cellulose-binding domain protein; KEGG: glycoside hydrolase family protein; SMART: type 3a cellulose-binding domain protein. (832 aa)    
Predicted Functional Partners:
Bccel_2753
KEGG: cellulose 1,4-beta-cellobiosidase; PFAM: glycoside hydrolase family 48.
 
0.934
Bccel_0895
KEGG: cellulose 1,4-beta-cellobiosidase; PFAM: glycoside hydrolase family 48.
 
0.932
Bccel_1771
Cellulose 1,4-beta-cellobiosidase; KEGG: glycoside hydrolase family protein; PFAM: glycoside hydrolase family 48.
 
0.916
Bccel_1262
PFAM: lipolytic protein G-D-S-L family; KEGG: cellulose-binding family II protein.
 
 0.863
Bccel_4191
KEGG: glycoside hydrolase family protein; PFAM: glycoside hydrolase family 5, cellulose-binding family II; SMART: Carbohydrate binding domain CBM49, cellulose-binding family II.
 
 
 0.805
Bccel_2491
Mannan endo-1,4-beta-mannosidase; KEGG: endoglucanase; PFAM: glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.796
Bccel_0386
PFAM: glycoside hydrolase family 5; KEGG: glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.786
Bccel_2492
Mannan endo-1,4-beta-mannosidase, Cellulase; KEGG: celN, glycoside hydrolase family protein; PFAM: glycoside hydrolase family 5.
 
  
  0.773
Bccel_4529
Type 3a cellulose-binding domain protein; KEGG: cellulase., cellulose 1,4-beta-cellobiosidase; PFAM: type 3a cellulose-binding domain protein; SMART: type 3a cellulose-binding domain protein.
 
 
  0.771
Bccel_4843
KEGG: Cellulose binding domain-containing protein; PFAM: type 3a cellulose-binding domain protein; SMART: type 3a cellulose-binding domain protein.
 
 
  0.767
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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