STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_1423PFAM: UDP-glucuronosyl/UDP-glucosyltransferase, glycosyl transferase family 28; KEGG: sterol 3-beta-glucosyltransferase. (398 aa)    
Predicted Functional Partners:
Bccel_1479
6-deoxyerythronolide-B synthase; PFAM: KR domain protein, acyl carrier protein familyprotein, Beta-ketoacyl synthase, Acyl transferase; KEGG: polyketide synthase family protein; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase/Fatty acid synthase, KR, Polyketide synthase, acyl transferase domain-containing protein.
 
  
 0.746
Bccel_2229
6-deoxyerythronolide-B synthase, 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Acyl transferase, Beta-ketoacyl synthase, KR domain protein, acyl carrier protein familyprotein; KEGG: polyketide synthase family protein; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase/Fatty acid synthase, KR, Polyketide synthase, acyl transferase domain-containing protein.
 
  
 0.744
Bccel_1682
KEGG: thioester reductase; TIGRFAM: thioester reductase domain protein; PFAM: Male sterility domain-containing protein.
 
  
 0.622
Bccel_1421
KEGG: hypothetical protein.
       0.580
Bccel_1422
Hypothetical protein.
       0.580
Bccel_5613
TIGRFAM: non-ribosomal peptide synthetase domain protein, amino acid adenylation domain protein; KEGG: non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase, acyl carrier protein familyprotein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.546
Bccel_1420
PFAM: GCN5-related N-acetyltransferase; KEGG: GNAT family acetyltransferase.
       0.506
Bccel_4530
Hypothetical protein; KEGG: fold5, putative acetyltransferases and hydrolases with the alpha/beta hydrolase Fold.
  
  
  0.491
Bccel_0386
PFAM: glycoside hydrolase family 5; KEGG: glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.479
Bccel_1424
PFAM: Tellurite resistance TerB; KEGG: terB, tellurium resistance protein.
     
 0.479
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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