Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_1452KEGG: cellulase; PFAM: peptidase M42 family protein. (351 aa)    
Predicted Functional Partners:
Bccel_1454
PFAM: peptidase M42 family protein; KEGG: lysyl aminopeptidase.
 
     0.945
Bccel_1453
PFAM: peptidase M42 family protein; KEGG: peptidase family protein.
 
    
0.828
Bccel_1451
Cellulase; KEGG: peptidase family protein; PFAM: peptidase M42 family protein.
 
    
0.588
Bccel_3489
Hypothetical protein; KEGG: fibronectin type III domain-containing protein.
     
 0.573
Bccel_0904
Glycosyltransferase 36; KEGG: cellobiose phosphorylase; PFAM: glycosyltransferase 36, glycosyltransferase 36 associated protein, carbohydrate binding protein; SMART: carbohydrate binding protein.
     
 0.413
Bccel_2005
KEGG: glycosyltransferase; PFAM: glycosyltransferase 36, carbohydrate binding protein, glycosyltransferase 36 associated protein; SMART: carbohydrate binding protein.
     
 0.413
Bccel_4449
KEGG: glycosyltransferase; PFAM: Protein of unknown function DUF2329, glycosyltransferase 36 associated protein, glycosyltransferase 36, Protein of unknown function DUF3131, carbohydrate binding protein; SMART: carbohydrate binding protein.
     
 0.413
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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