STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_1683KEGG: Pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent. (280 aa)    
Predicted Functional Partners:
Bccel_1689
PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: hypothetical protein.
  
 
 0.871
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
 
 
 0.799
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
 
 
 0.791
Bccel_1682
KEGG: thioester reductase; TIGRFAM: thioester reductase domain protein; PFAM: Male sterility domain-containing protein.
     
 0.721
Bccel_1681
KEGG: NAD-binding 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein, 3-hydroxyacyl-CoA dehydrogenase domain-containing protein.
     
 0.707
Bccel_1320
TIGRFAM: formate acetyltransferase; KEGG: formate acetyltransferase 1; PFAM: pyruvate formate-lyase PFL, formate C-acetyltransferase glycine radical.
    
 0.673
Bccel_4489
TIGRFAM: formate acetyltransferase; KEGG: formate acetyltransferase 1; PFAM: pyruvate formate-lyase PFL, formate C-acetyltransferase glycine radical.
    
 0.673
Bccel_3490
KEGG: glutamate synthase family protein; PFAM: ferredoxin-dependent glutamate synthase, glutamine amidotransferase class-II, glutamate synthase alpha subunit domain protein, glutamate synthase.
     
 0.651
Bccel_0979
Acetaldehyde dehydrogenase (acetylating); KEGG: alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase, Aldehyde Dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.623
Bccel_1680
PFAM: acyl carrier protein familyprotein; KEGG: hypothetical protein.
     
 0.612
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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