STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_1744PFAM: beta-lactamase; KEGG: beta-lactamase. (168 aa)    
Predicted Functional Partners:
Bccel_1745
PFAM: beta-lactamase; KEGG: beta-lactamase.
     0.988
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.793
Bccel_5714
D-Ala-D-Ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
 
 
 0.768
Bccel_4009
PFAM: glycoside hydrolase family 3 domain protein; KEGG: beta-N-acetylhexosaminidase; Belongs to the glycosyl hydrolase 3 family.
 
 
 0.734
Bccel_4126
Beta-glucosidase; KEGG: glycoside hydrolase; PFAM: glycoside hydrolase family 3 domain protein, Fibronectin type III-like domain; Belongs to the glycosyl hydrolase 3 family.
 
 
 0.719
Bccel_5320
KEGG: bglX, beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein, Fibronectin type III-like domain.
 
 
 0.719
Bccel_3085
PFAM: beta-lactamase; KEGG: penicillin-binding protein, beta-lactamase class C.
 
     0.716
Bccel_3298
Beta-glucosidase; KEGG: bxlB, beta-xylosidase BxlB; PFAM: glycoside hydrolase family 3 domain protein, Fibronectin type III-like domain.
 
 
 0.713
Bccel_0905
Beta-N-acetylhexosaminidase; KEGG: beta-glucosidase-like glycosyl hydrolase; PFAM: glycoside hydrolase family 3 domain protein.
  
 
 0.702
Bccel_0906
KEGG: glycoside hydrolase family protein.
  
 
 0.674
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.