STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_2009Cell division FtsK/SpoIIIE; KEGG: DNA segregation ATPase FtsK; PFAM: cell division FtsK/SpoIIIE, DNA translocase ftsK gamma, Domain of unknown function DUF4117; SMART: DNA translocase ftsK gamma, AAA ATPase. (803 aa)    
Predicted Functional Partners:
Bccel_0286
KEGG: cell division septal protein.
   
 
 0.841
Bccel_2778
KEGG: hypothetical protein; Belongs to the WXG100 family.
   
 
 0.782
Bccel_3216
KEGG: YD repeat-containing protein; TIGRFAM: RHS repeat-associated core domain-containing protein, YD repeat protein; PFAM: YD repeat-containing protein.
   
 
 0.771
Bccel_5829
KEGG: hypothetical protein.
   
 
 0.771
Bccel_5848
KEGG: hypothetical protein.
   
 
 0.771
Bccel_5859
KEGG: YD repeat protein.
   
 
 0.771
Bccel_5869
KEGG: YD repeat protein.
   
 
 0.771
Bccel_5025
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family.
  
  
 0.705
Bccel_5752
KEGG: parB-like partition protein; Belongs to the ParB family.
  
  
 0.703
Bccel_5757
KEGG: parB-like partition protein.
  
  
 0.703
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.