STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_2113Sialate O-acetylesterase; KEGG: dockerin-like protein; PFAM: protein of unknown function DUF303 acetylesterase. (660 aa)    
Predicted Functional Partners:
Bccel_0691
KEGG: G-D-S-L family lipolytic protein.
 
     0.755
Bccel_1435
KEGG: hypothetical protein.
 
     0.736
Bccel_4966
Xylan 1,4-beta-xylosidase; KEGG: glycoside hydrolase; PFAM: glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.623
Bccel_5538
KEGG: hypothetical protein.
 
 
  0.619
Bccel_4064
Hypothetical protein; KEGG: cellulose 1,4-beta-cellobiosidase.
  
  
  0.609
Bccel_3118
Hypothetical protein; KEGG: family 6 carbohydrate binding protein.
  
     0.603
Bccel_1712
Xylan 1,4-beta-xylosidase; KEGG: beta-xylosidase; PFAM: glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.601
Bccel_5050
PFAM: copper amine oxidase-like domain-containing protein; KEGG: lysophospholipase L1-like esterase.
  
     0.594
Bccel_3093
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10, glycoside hydrolase family 11; KEGG: beta-1,4-xylanase; SMART: glycoside hydrolase family 10; Belongs to the glycosyl hydrolase 10 (cellulase F) family.
 
0.565
Bccel_3117
Alpha-L-fucosidase; KEGG: family 6 carbohydrate binding protein.
  
     0.560
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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