STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_2114KEGG: kwg repeat protein. (409 aa)    
Predicted Functional Partners:
Bccel_5128
SMART: AAA ATPase, CBS domain containing protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; KEGG: glycine betaine ABC transporter ATP-binding protein; PFAM: ABC transporter related protein, CBS domain containing protein.
  
 0.968
Bccel_5127
PFAM: ABC-type transporter, integral membrane subunit; KEGG: glycine betaine ABC transporter permease.
  
 
 0.792
Bccel_5897
PFAM: ABC-type transporter, integral membrane subunit; KEGG: glycine betaine ABC transporter permease.
  
 
 0.792
Bccel_2115
KEGG: kwg repeat protein.
       0.773
Bccel_4619
PFAM: Domain of unknown function DUF3298-containing protein, KWG Leptospira repeat protein; KEGG: hypothetical protein.
  
     0.677
Bccel_1667
PFAM: Spore coat protein CotH, Intermediate filament domain protein, Fn3 associated repeat, S-layer domain-containing protein; KEGG: spore coat protein CotH.
  
     0.500
Bccel_2113
Sialate O-acetylesterase; KEGG: dockerin-like protein; PFAM: protein of unknown function DUF303 acetylesterase.
       0.465
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
    0.457
Bccel_2116
PFAM: copper amine oxidase-like domain-containing protein, alpha-2-macroglobulin; KEGG: large extracellular alpha-helical protein.
  
    0.453
Bccel_1545
KEGG: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein, PAS domain containing protein.
  
  
  0.439
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.