STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_2166Appr-1-p processing domain protein; KEGG: putative phosphatase, C-terminal domain of histone macro H2A1 like protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein. (157 aa)    
Predicted Functional Partners:
Bccel_2167
Hypothetical protein.
       0.773
Bccel_2170
PFAM: Protein of unknown function DUF4291; KEGG: hypothetical protein.
 
     0.756
Bccel_2484
PFAM: ADP-ribosylation/Crystallin J1; KEGG: ADP-ribosylation/Crystallin J1.
 
   
 0.739
Bccel_2165
KEGG: hypothetical protein.
       0.718
Bccel_4564
Palmitoyl-CoA hydrolase; KEGG: M1_2542, putative acyl-CoA thioesterase; PFAM: BAAT/Acyl-CoA thioester hydrolase, acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase.
  
   
 0.690
Bccel_2552
PFAM: BAAT/Acyl-CoA thioester hydrolase; KEGG: Acyl-CoA thioesterase 1.
  
     0.682
Bccel_1449
CoA-disulfide reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, SirA-like domain-containing protein, Rhodanese-like protein, FAD-dependent pyridine nucleotide-disulfide oxidoreductase; KEGG: NAD(FAD)-dependent dehydrogenase; SMART: Rhodanese-like protein; Belongs to the sulfur carrier protein TusA family.
  
 0.635
Bccel_2169
PFAM: Protein of unknown function DUF4291; KEGG: hypothetical protein.
 
     0.622
Bccel_2726
PFAM: Ankyrin repeat-containing domain-containing protein; KEGG: ankyrin repeat-containing protein.
  
 
 
 0.611
Bccel_1412
PFAM: GH3 auxin-responsive promoter; KEGG: GH3 auxin-responsive promoter-binding protein.
 
     0.607
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.