Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Bccel_2189KEGG: hypothetical protein. (138 aa)    
Predicted Functional Partners:
Bccel_1321
SMART: Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; KEGG: adenylosuccinate lyase; PFAM: Lyase 1, N-terminal, Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.625
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
     
  0.625
Bccel_2588
KEGG: MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase.
     
  0.625
Bccel_2596
Purine operon repressor, PurR; KEGG: pur operon repressor; TIGRFAM: pur operon repressor; PFAM: purine repressor, phosphoribosyltransferase.
     
  0.625
Bccel_5225
PFAM: purine or other phosphorylase family 1; KEGG: nucleoside phosphorylase.
     
  0.625
Bccel_1987
PFAM: metallophosphoesterase; KEGG: UshA protein; Belongs to the 5'-nucleotidase family.
     
  0.556
Bccel_2451
PFAM: S-layer domain-containing protein; KEGG: S-layer protein.
     
  0.556
Bccel_2190
PFAM: transposase IS111A/IS1328/IS1533, transposase IS116/IS110/IS902 family protein; KEGG: transposase IS116/IS110/IS902 family protein.
       0.512
Bccel_5704
PFAM: Domain of unknown function DUF3706; KEGG: hypothetical protein.
     
  0.440
Bccel_2186
KEGG: hypothetical protein.
       0.419
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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