Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_2191KEGG: hypothetical protein. (82 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.723
Bccel_2192
KEGG: hypothetical protein.
       0.697
Bccel_2726
PFAM: Ankyrin repeat-containing domain-containing protein; KEGG: ankyrin repeat-containing protein.
   
 0.621
Bccel_1764
PFAM: Ankyrin repeat-containing domain-containing protein; KEGG: ankyrin.
    
 0.610
Bccel_2888
PFAM: Ankyrin repeat-containing domain-containing protein; KEGG: hypothetical protein.
    
 0.610
Bccel_4523
PFAM: Ankyrin repeat-containing domain-containing protein; KEGG: hypothetical protein.
    
 0.610
Bccel_3807
KEGG: hypothetical protein.
    
 0.601
Bccel_2193
Hypothetical protein.
       0.485
Bccel_3110
Ricin B lectin; KEGG: surface layer protein; PFAM: Ricin B lectin; SMART: Ricin B lectin.
  
 
 0.446
Bccel_2194
Hypothetical protein.
       0.441
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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