STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_2212PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cobyrinic acid a,c-diamide synthase. (227 aa)    
Predicted Functional Partners:
Bccel_5025
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family.
 
 0.925
Bccel_5752
KEGG: parB-like partition protein; Belongs to the ParB family.
 
 0.922
Bccel_5757
KEGG: parB-like partition protein.
 
 0.922
Bccel_2211
PFAM: ParB domain protein nuclease; KEGG: ParB-like partition protein.
 
 
 0.910
Bccel_5004
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family.
 
 0.892
Bccel_3055
KEGG: ParB domain-containing protein nuclease; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease.
 
 
 0.859
Bccel_5451
KEGG: ParB domain-containing protein nuclease; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease.
 
 
 0.859
Bccel_4816
KEGG: ParB domain-containing protein nuclease; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease.
 
 
 0.838
Bccel_2210
KEGG: hypothetical protein.
       0.773
Bccel_2208
Hypothetical protein.
       0.648
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.