Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_2227KEGG: competence protein ComEA; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Soluble ligand binding domain-containing protein. (262 aa)    
Predicted Functional Partners:
Bccel_1867
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
 
 0.986
Bccel_2100
Hypothetical protein; KEGG: exopolysaccharide biosynthesis-like protein.
  
 0.985
Bccel_1845
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: algA, mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase, mannose-6-phosphate isomerase type II; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.956
Bccel_1868
TIGRFAM: capsular exopolysaccharide family; KEGG: lipopolysaccharide biosynthesis protein; PFAM: AAA domain, lipopolysaccharide biosynthesis protein.
  
 0.857
Bccel_1975
Hypothetical protein; KEGG: prepilin-type N-terminal cleavage/methylation domain-containing protein.
   
  
 0.847
Bccel_1643
PFAM: sugar transferase; KEGG: UDP-galactose phosphate transferase.
  
 
 0.842
Bccel_2095
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
 
 0.842
Bccel_4914
Undecaprenyl-phosphate galactose phosphotransferase; KEGG: glycosyl-1-phosphate-transferase; PFAM: sugar transferase.
  
 
 0.842
Bccel_0826
PFAM: polysaccharide biosynthesis protein CapD; KEGG: polysaccharide biosynthesis protein CapD.
  
 
 0.833
Bccel_4913
PFAM: polysaccharide biosynthesis protein CapD; KEGG: polysaccharide biosynthesis protein CapD.
  
 
 0.833
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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