Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
Bccel_2452PFAM: S-layer domain-containing protein; KEGG: S-layer protein. (998 aa)    
Predicted Functional Partners:
Bccel_2451
PFAM: S-layer domain-containing protein; KEGG: S-layer protein.
 
     0.922
Bccel_5645
PFAM: S-layer domain-containing protein; KEGG: hypothetical protein.
  
     0.775
Bccel_3672
PFAM: cellulosome anchoring protein cohesin region; KEGG: cellulosome anchoring protein cohesin subunit.
  
     0.771
Bccel_3801
PFAM: Domain of unknown function DUF4098; KEGG: hypothetical protein.
  
     0.769
Bccel_1059
KEGG: Ig domain-containing protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin, APHP domain protein; SMART: Ig domain protein group 2 domain protein.
  
     0.766
Bccel_0677
PFAM: Flagellar hook-length control protein-like protein; KEGG: hypothetical protein.
  
     0.764
Bccel_1937
KEGG: hypothetical protein.
  
     0.760
Bccel_4987
KEGG: AAA ATPase, central region; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
  
     0.753
Bccel_4841
KEGG: hypothetical protein.
  
     0.751
Bccel_5006
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase domain-containing protein.
  
     0.751
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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