Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_2501TIGRFAM: glucokinase, ROK family; KEGG: ROK family glucokinase; PFAM: ROK family protein. (315 aa)    
Predicted Functional Partners:
Bccel_4362
KEGG: phosphomannose isomerase; PFAM: mannose-6-phosphate isomerase type I.
 
 
 0.952
Bccel_3894
KEGG: UDP-N-acetyl-D-glucosamine 2-epimerase; TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; PFAM: UDP-N-acetylglucosamine 2-epimerase.
 
  
 0.949
pgi
HAMAP : Glucose-6-phosphate isomerase; KEGG: glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); Belongs to the GPI family.
 
  
 0.913
Bccel_0547
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; Belongs to the phosphohexose mutase family.
 
 
 0.843
Bccel_1845
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: algA, mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase, mannose-6-phosphate isomerase type II; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.806
Bccel_3715
TIGRFAM: fructose-1,6-bisphosphate aldolase, class II, ketose-bisphosphate aldolase; KEGG: fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II.
    
 0.784
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
     
 0.780
xylA
PFAM: Xylose isomerase domain-containing protein TIM barrel; TIGRFAM: xylose isomerase; HAMAP : Xylose isomerase; KEGG: xylA2, xylose isomerase XylA; Belongs to the xylose isomerase family.
    
 0.775
Bccel_0865
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
    
 0.773
Bccel_3797
KEGG: protein tyrosine phosphatase; PFAM: Phosphotyrosine protein phosphatase I superfamily; SMART: Phosphotyrosine protein phosphatase I superfamily; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 0.751
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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