Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_2716TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein; KEGG: hypothetical protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein. (472 aa)    
Predicted Functional Partners:
Bccel_1552
KEGG: response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 0.987
Bccel_5551
KEGG: response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 0.985
Bccel_3363
KEGG: two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein, response regulator receiver, helix-turn-helix Fis-type; SMART: response regulator receiver, AAA ATPase.
 
 0.981
Bccel_1542
KEGG: histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.977
Bccel_3644
KEGG: response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 0.966
Bccel_1430
Diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: diguanylate cyclase/phosphodiesterase.
   
 0.951
Bccel_4610
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold-4 domain protein, PAS fold-3 domain protein, response regulator receiver, Hpt domain protein; KEGG: signal transduction histidine kinase-like protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAC repeat-containing protein, GAF domain protein, PAS domain containing protein, response regulator receiver.
 
 
0.950
Bccel_5281
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; KEGG: multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein.
 
 
0.950
Bccel_2067
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; KEGG: PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein, histidine kinase A domain protein.
 
 
0.948
Bccel_2257
KEGG: nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SMART: nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
  
 0.947
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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