STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_3055KEGG: ParB domain-containing protein nuclease; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease. (344 aa)    
Predicted Functional Partners:
Bccel_3056
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cobyrinic acid a,c-diamide synthase.
 
 
 0.966
Bccel_3052
PFAM: Domain of unknown function DUF3991; KEGG: zinc finger CHC2-family protein.
 
     0.897
Bccel_3054
KEGG: SNF2 family protein; PFAM: SNF2-related protein, Protein of unknown function DUF3846, helicase domain-containing protein; SMART: DEAD-like helicase, helicase domain-containing protein.
 
     0.877
Bccel_2212
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cobyrinic acid a,c-diamide synthase.
 
 
 0.859
Bccel_5450
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cobyrinic acid a,c-diamide synthase.
 
 
 0.857
Bccel_4817
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cobyrinic acid a,c-diamide synthase.
 
 
 0.848
Bccel_3050
KEGG: hypothetical protein.
 
     0.820
Bccel_5024
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: chromosome partitioning ATPase.
 
 
 0.742
Bccel_0004
PFAM: Recombinase, Recombinase zinc beta ribbon domain; KEGG: recombinase; overlaps another CDS with the same product name.
 
     0.735
Bccel_4814
PFAM: Domain of unknown function DUF3991; KEGG: zinc finger CHC2-family protein.
  
     0.734
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.