Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_3094KEGG: CBM6-containing protein,glycosyl hydrolase family 11. (81 aa)    
Predicted Functional Partners:
Bccel_3093
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10, glycoside hydrolase family 11; KEGG: beta-1,4-xylanase; SMART: glycoside hydrolase family 10; Belongs to the glycosyl hydrolase 10 (cellulase F) family.
    
 0.638
Bccel_0023
Hypothetical protein; KEGG: glycosyl transferase family protein.
  
 
  0.480
Bccel_2647
KEGG: hypothetical protein.
  
 
  0.480
Bccel_4924
KEGG: hypothetical protein.
  
 
  0.480
Bccel_4981
KEGG: hypothetical protein.
  
 
  0.480
Bccel_5173
Hypothetical protein.
  
 
  0.480
Bccel_5663
Hypothetical protein; KEGG: glycosyl transferase family protein.
  
 
  0.480
Bccel_3489
Hypothetical protein; KEGG: fibronectin type III domain-containing protein.
    
 0.474
Bccel_0722
PFAM: lipolytic protein G-D-S-L family; KEGG: glycoside hydrolase family protein.
    
 0.466
Bccel_0723
PFAM: glycoside hydrolase family 5; KEGG: glycoside hydrolase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.466
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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