Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_3095Alpha-N-arabinofuranosidase, Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10, glycoside hydrolase family 62, Carbohydrate binding family 6; KEGG: glycoside hydrolase; SMART: glycoside hydrolase family 10, cellulose binding type IV. (911 aa)    
Predicted Functional Partners:
Bccel_0723
PFAM: glycoside hydrolase family 5; KEGG: glycoside hydrolase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.889
Bccel_1712
Xylan 1,4-beta-xylosidase; KEGG: beta-xylosidase; PFAM: glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.812
Bccel_3115
PFAM: glycoside hydrolase family 43; KEGG: glycoside hydrolase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.809
Bccel_4966
Xylan 1,4-beta-xylosidase; KEGG: glycoside hydrolase; PFAM: glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.809
Bccel_3093
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10, glycoside hydrolase family 11; KEGG: beta-1,4-xylanase; SMART: glycoside hydrolase family 10; Belongs to the glycosyl hydrolase 10 (cellulase F) family.
 
 
  
0.808
Bccel_3096
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: xylanase B; SMART: glycoside hydrolase family 10.
 
 
  
0.800
Bccel_3806
KEGG: pectate lyase; PFAM: Pectate lyase.
  
 
  0.797
Bccel_0857
KEGG: endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11, Carbohydrate binding family 6; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
   
 0.791
Bccel_4937
Mannan endo-1,4-beta-mannosidase; PFAM: Endoglucanase H/Glycosyl hydrolase family 26, Ricin B lectin; KEGG: mannan endo-1,4-beta-mannosidase; SMART: Ricin B lectin; Belongs to the glycosyl hydrolase 26 family.
 
  
 0.791
Bccel_3083
KEGG: alpha-L-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; SMART: alpha-L-arabinofuranosidase domain protein.
 
  
 0.780
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.