Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_3115PFAM: glycoside hydrolase family 43; KEGG: glycoside hydrolase; Belongs to the glycosyl hydrolase 43 family. (306 aa)    
Predicted Functional Partners:
Bccel_3114
KEGG: glycoside hydrolase; PFAM: Carbohydrate binding family 6; SMART: cellulose binding type IV.
     0.987
Bccel_3097
Alpha-N-arabinofuranosidase; PFAM: glycoside hydrolase family 43, Carbohydrate binding family 6; KEGG: beta-xylosidase; SMART: cellulose binding type IV; Belongs to the glycosyl hydrolase 43 family.
 
    
0.927
Bccel_3117
Alpha-L-fucosidase; KEGG: family 6 carbohydrate binding protein.
     0.918
Bccel_1712
Xylan 1,4-beta-xylosidase; KEGG: beta-xylosidase; PFAM: glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.900
Bccel_3113
Alpha-N-arabinofuranosidase; PFAM: glycoside hydrolase family 43, Carbohydrate binding family 6, protein of unknown function DUF303 acetylesterase; KEGG: family 6 carbohydrate binding protein; SMART: cellulose binding type IV.
     0.896
Bccel_3299
KEGG: alpha-glucuronidase; PFAM: Glycosyl hydrolase 67 middle domain protein, glycosyl hydrolase 67 C-teriminal domain protein, glycoside hydrolase family 67; Belongs to the glycosyl hydrolase 67 family.
   
 0.886
Bccel_3119
KEGG: carbohydrate binding family protein; PFAM: Carbohydrate binding family 6; SMART: cellulose binding type IV.
     0.874
Bccel_3093
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10, glycoside hydrolase family 11; KEGG: beta-1,4-xylanase; SMART: glycoside hydrolase family 10; Belongs to the glycosyl hydrolase 10 (cellulase F) family.
 
  
 0.866
Bccel_3118
Hypothetical protein; KEGG: family 6 carbohydrate binding protein.
 
     0.862
Bccel_3083
KEGG: alpha-L-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; SMART: alpha-L-arabinofuranosidase domain protein.
 
  
 0.849
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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