STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_3136KEGG: transcriptional regulator; PFAM: CBS domain containing protein, amino acid-binding ACT domain-containing protein; SMART: CBS domain containing protein. (215 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 0.963
Bccel_3138
Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: livG, high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG; SMART: AAA ATPase.
 
    0.957
Bccel_3139
PFAM: ABC-type transporter, integral membrane subunit; KEGG: livM, high-affinity branched-chain amino acid ABC transporter system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
 
    0.937
Bccel_3137
Fe(3+)-transporting ATPase; PFAM: ABC transporter related protein; KEGG: livF, high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF; SMART: AAA ATPase.
 
    0.919
Bccel_3140
PFAM: ABC-type transporter, integral membrane subunit; KEGG: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.918
Bccel_3141
Hypothetical protein; KEGG: livK, high-affinity branched-chain amino acid ABC transporter systemsubstrate binding protein LivK.
 
    0.882
Bccel_1293
PFAM: leucine-rich repeat-containing protein; KEGG: small GTP-binding protein.
  
 0.874
Bccel_1504
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.852
Bccel_5564
Methionine synthase; PFAM: homocysteine S-methyltransferase, cobalamin B12-binding domain protein, Methionine synthase B12-binding module cap domain protein, dihydropteroate synthase DHPS; KEGG: homocysteine S-methyltransferase; SMART: Methionine synthase B12-binding module cap domain protein.
  
 
 0.852
Bccel_3959
SMART: Chorismate mutase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; PFAM: DAHP synthetase I/KDSA, Chorismate mutase, type II.
    
 0.844
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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