Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Bccel_3136KEGG: transcriptional regulator; PFAM: CBS domain containing protein, amino acid-binding ACT domain-containing protein; SMART: CBS domain containing protein. (215 aa)    
Predicted Functional Partners:
Bccel_3138
Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: livG, high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG; SMART: AAA ATPase.
 
    0.956
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 0.952
Bccel_3139
PFAM: ABC-type transporter, integral membrane subunit; KEGG: livM, high-affinity branched-chain amino acid ABC transporter system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
 
    0.934
Bccel_3137
Fe(3+)-transporting ATPase; PFAM: ABC transporter related protein; KEGG: livF, high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF; SMART: AAA ATPase.
 
    0.915
Bccel_3140
PFAM: ABC-type transporter, integral membrane subunit; KEGG: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.913
Bccel_3141
Hypothetical protein; KEGG: livK, high-affinity branched-chain amino acid ABC transporter systemsubstrate binding protein LivK.
 
    0.878
rpsB
TIGRFAM: ribosomal protein S2; HAMAP : ribosomal protein S2; KEGG: rpsB, 30S ribosomal protein S2; PFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
   
   0.839
Bccel_3878
TIGRFAM: pyruvate kinase; KEGG: pyruvate kinase; PFAM: Pyruvate kinase barrel, Pyruvate kinase -like protein, PEP-utilising protein mobile region; Belongs to the pyruvate kinase family.
  
 
 0.835
Bccel_3959
SMART: Chorismate mutase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; PFAM: DAHP synthetase I/KDSA, Chorismate mutase, type II.
    
 0.827
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
   
   0.826
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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