Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_3144KEGG: hypothetical protein. (354 aa)    
Predicted Functional Partners:
Bccel_3146
PFAM: UbiA prenyltransferase; KEGG: 4-hydroxybenzoate octaprenyltransferase.
 
    0.958
Bccel_3150
PFAM: protein of unknown function DUF46; KEGG: CDP-diglyceride synthetase.
 
     0.932
Bccel_3145
PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding protein, PEP-utilising protein mobile region; KEGG: phosphoenolpyruvate synthase.
 
     0.891
Bccel_3148
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: phosphatidylserine synthase.
 
     0.844
Bccel_3149
Pyruvate, water dikinase; KEGG: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding protein, PEP-utilising protein mobile region.
 
     0.842
Bccel_3147
KEGG: psd, phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related protein; Belongs to the phosphatidylserine decarboxylase family.
 
     0.813
metG-2
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.756
hisI
PFAM: phosphoribosyl-AMP cyclohydrolase, Phosphoribosyl-ATP pyrophosphohydrolase-like protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; HAMAP : Phosphoribosyl-ATP pyrophosphatase, Phosphoribosyl-AMP cyclohydrolase, Histidine biosynthesis bifunctional protein hisIE; KEGG: phosphoribosyl-AMP cyclohydrolase, phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family.
    
  0.735
Bccel_0654
PFAM: VanZ family protein; KEGG: hypothetical protein.
     
 0.669
hisH
Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
    
  0.668
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.