STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_3190KEGG: hypothetical protein. (82 aa)    
Predicted Functional Partners:
Bccel_3191
Thermitase; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin, cellulosome anchoring protein cohesin region; KEGG: subtilisin-like serine protease; SMART: Hedgehog/intein hint domain-containing protein; Belongs to the peptidase S8 family.
       0.709
Bccel_0982
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: NADH:ubiquinone oxidoreductase 24 kD subunit.
    
 0.692
Bccel_2281
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, NADH dehydrogenase (ubiquinone) 24 kDa subunit, NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding protein, Soluble ligand binding domain-containing protein; KEGG: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding protein.
  
 
 0.681
Bccel_5660
PFAM: Rubredoxin domain; KEGG: rubredoxin-type Fe(Cys)4 protein.
  
  
 0.681
Bccel_3751
Peroxiredoxin; KEGG: alkyl hydroperoxide reductase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
  
 0.476
Bccel_4470
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.476
Bccel_4116
Glutamate dehydrogenase (NADP(+)); PFAM: Glu/Leu/Phe/Val dehydrogenase, Glu/Leu/Phe/Val dehydrogenase dimerization region; KEGG: glutamate dehydrogenase/leucine dehydrogenase; SMART: Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.444
Bccel_4570
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: Fe2+/Zn2+ uptake regulation protein; Belongs to the Fur family.
  
  
 0.432
Bccel_4744
PFAM: ferric-uptake regulator; KEGG: ferric uptake regulator, Fur family; Belongs to the Fur family.
  
  
 0.432
Bccel_5692
PFAM: ferric-uptake regulator; KEGG: ferric uptake regulator family protein; Belongs to the Fur family.
  
  
 0.432
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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