STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_3374KEGG: CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type. (337 aa)    
Predicted Functional Partners:
Bccel_3376
PFAM: Protein of unknown function DUF2229, CoA enzyme activase; KEGG: hypothetical protein.
     0.992
Bccel_3714
PFAM: Protein of unknown function DUF2229, CoA enzyme activase; KEGG: hypothetical protein.
     0.978
Bccel_3713
KEGG: hypothetical protein.
   
 0.963
Bccel_3375
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: hypothetical protein.
   
 0.939
Bccel_3416
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: 2-hydroxyglutaryl-CoA dehydratase subunit D.
 
 0.863
Bccel_2546
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: 2-hydroxyglutaryl-CoA dehydratase subunit D.
 0.853
Bccel_3413
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: 2-hydroxyglutaryl-CoA dehydratase subunit D.
 
 0.851
Bccel_3373
CoA-substrate-specific enzyme activase; KEGG: putative R-2-hydroxyglutaryl-CoA dehydratase subunit/R-2-hydroxyglutaryl-CoA dehydratase activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase, 2-hydroxyglutaryl-CoA dehydratase D-component, ATPase BadF/BadG/BcrA/BcrD type.
 
   
0.628
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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