Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_3397KEGG: peptidoglycan N-acetylglucosamine deacetylase; PFAM: polysaccharide deacetylase, glycoside hydrolase family 18; SMART: chitinase II. (1344 aa)    
Predicted Functional Partners:
Bccel_0386
PFAM: glycoside hydrolase family 5; KEGG: glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.896
Bccel_5153
PFAM: Endoglucanase H/Glycosyl hydrolase family 26; KEGG: beta-mannanase; Belongs to the glycosyl hydrolase 26 family.
    
 0.879
Bccel_3489
Hypothetical protein; KEGG: fibronectin type III domain-containing protein.
 
  
 0.877
Bccel_0685
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: diguanylate cyclase/phosphodiesterase; SMART: GGDEF domain containing protein.
  
 
 0.876
Bccel_0722
PFAM: lipolytic protein G-D-S-L family; KEGG: glycoside hydrolase family protein.
    
 0.856
Bccel_0723
PFAM: glycoside hydrolase family 5; KEGG: glycoside hydrolase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.856
Bccel_2462
PFAM: lipolytic protein G-D-S-L family; KEGG: glycoside hydrolase family protein.
    
 0.856
Bccel_2454
KEGG: glycoside hydrolase; PFAM: glycoside hydrolase family 18; SMART: chitinase II; Belongs to the glycosyl hydrolase 18 family.
    
 0.845
Bccel_1845
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: algA, mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase, mannose-6-phosphate isomerase type II; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.842
Bccel_0905
Beta-N-acetylhexosaminidase; KEGG: beta-glucosidase-like glycosyl hydrolase; PFAM: glycoside hydrolase family 3 domain protein.
    
 0.824
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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