Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_3403PFAM: protein kinase, PASTA domain containing protein; KEGG: serine/threonine protein kinase with PASTA sensor(s); SMART: serine/threonine protein kinase, PASTA domain containing protein. (676 aa)    
Predicted Functional Partners:
Bccel_3404
KEGG: protein serine/threonine phosphatase; PFAM: protein phosphatase 2C domain protein; SMART: protein phosphatase 2C domain protein.
 
 0.989
Bccel_0331
SMART: protein phosphatase 2C domain protein; KEGG: protein serine/threonine phosphatase.
 
 
 0.964
Bccel_5745
SMART: protein phosphatase 2C domain protein; KEGG: protein phosphatase 2C.
 
 
 0.964
rsgA
Ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
 
  
 0.921
Bccel_5263
KEGG: FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
 
 
 
 0.920
Bccel_2780
FHA domain containing protein; TIGRFAM: Type VII secretion protein EssC; PFAM: cell division FtsK/SpoIIIE, Forkhead-associated protein; KEGG: FHA domain-containing protein; SMART: Forkhead-associated protein, AAA ATPase.
   
 
 0.900
Bccel_5746
KEGG: serine/threonine protein phosphatase.
 
 
 0.881
Bccel_2308
FHA domain containing protein; KEGG: forkhead-associated protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
 
 
 
 0.871
Bccel_4610
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold-4 domain protein, PAS fold-3 domain protein, response regulator receiver, Hpt domain protein; KEGG: signal transduction histidine kinase-like protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAC repeat-containing protein, GAF domain protein, PAS domain containing protein, response regulator receiver.
   
 0.855
Bccel_0643
KEGG: hypothetical protein.
  
 
 0.847
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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