Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_3433KEGG: HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: Cof-like hydrolase, HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3. (268 aa)    
Predicted Functional Partners:
Bccel_3762
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.833
Bccel_3432
PFAM: phosphoribosyltransferase; KEGG: phosphoribosyltransferase.
 
     0.801
Bccel_2291
KEGG: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; SMART: AAA ATPase.
  
 
  0.771
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family.
    
 0.739
Bccel_2261
KEGG: HAD-superfamily hydrolase; TIGRFAM: Cof-like hydrolase, HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3.
 
 
 
0.716
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
    
 0.714
Bccel_1010
Mannose-1-phosphate guanylyltransferase, Phosphoglucosamine mutase; KEGG: nucleotidyltransferase; PFAM: Nucleotidyl transferase, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, transferase hexapeptide repeat containing protein.
  
 
 0.700
Bccel_3822
PFAM: Nucleotidyl transferase; KEGG: Nucleoside-diphosphate-sugar pyrophosphorylase family protein.
  
 
 0.700
Bccel_3823
Phosphoglucosamine mutase; KEGG: nucleotidyltransferase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, transferase hexapeptide repeat containing protein.
  
 
 0.700
Bccel_3761
TIGRFAM: riboflavin synthase, alpha subunit; KEGG: riboflavin synthase subunit alpha; PFAM: Lumazine-binding domain.
     
 0.682
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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