STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_3492PFAM: glycosyl transferase group 1; KEGG: group 1 glycosyl transferase. (412 aa)    
Predicted Functional Partners:
Bccel_3493
PFAM: glycosyl transferase group 1; KEGG: Glycosyltransferase.
 
  
 
0.831
Bccel_1797
Hypothetical protein; KEGG: alpha/beta fold family hydrolase.
 
 
 
 0.774
Bccel_0877
KEGG: maltooligosyl trehalose hydrolase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain-containing protein.
   
 0.739
glgB
1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.739
Bccel_2911
1,4-alpha-glucan branching enzyme; PFAM: alpha amylase catalytic region, glycoside hydrolase family 13 domain protein, alpha amylase all-beta; KEGG: 1,4-alpha-glucan branching enzyme; SMART: alpha amylase catalytic sub domain-containing protein.
   
 0.739
Bccel_1845
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: algA, mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase, mannose-6-phosphate isomerase type II; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.685
Bccel_1010
Mannose-1-phosphate guanylyltransferase, Phosphoglucosamine mutase; KEGG: nucleotidyltransferase; PFAM: Nucleotidyl transferase, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, transferase hexapeptide repeat containing protein.
  
 0.673
Bccel_3822
PFAM: Nucleotidyl transferase; KEGG: Nucleoside-diphosphate-sugar pyrophosphorylase family protein.
  
 0.673
Bccel_3823
Phosphoglucosamine mutase; KEGG: nucleotidyltransferase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, transferase hexapeptide repeat containing protein.
  
 0.673
mprF
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
 
  
 0.670
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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