STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_3690PFAM: aldehyde ferredoxin oxidoreductase, Aldehyde ferredoxin oxidoreductase; KEGG: aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase. (583 aa)    
Predicted Functional Partners:
Bccel_3691
PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: 4Fe-4S ferredoxin.
 
 0.996
Bccel_3683
PBP domain containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.811
Bccel_3689
KEGG: hypothetical protein.
       0.782
Bccel_3687
PFAM: PBP domain; KEGG: signal peptide protein.
 
   
 0.774
Bccel_3686
PFAM: ABC-type transporter, integral membrane subunit; KEGG: tungstate ABC transporter periplasmic protein.
 
   
 0.714
Bccel_0979
Acetaldehyde dehydrogenase (acetylating); KEGG: alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase, Aldehyde Dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.710
Bccel_3684
Molybdenum cofactor synthesis domain containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.707
Bccel_3755
SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain-containing protein; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain-containing protein, Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.583
pgk
HAMAP : Phosphoglycerate kinase; KEGG: 3-phosphoglycerate kinase; PFAM: phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.555
Bccel_0856
Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
   
  
 0.543
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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