STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_3704Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (175 aa)    
Predicted Functional Partners:
Bccel_3709
PFAM: heat shock protein Hsp90; KEGG: Heat shock protein Hsp90-like protein.
  
 0.969
Bccel_1479
6-deoxyerythronolide-B synthase; PFAM: KR domain protein, acyl carrier protein familyprotein, Beta-ketoacyl synthase, Acyl transferase; KEGG: polyketide synthase family protein; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase/Fatty acid synthase, KR, Polyketide synthase, acyl transferase domain-containing protein.
  
 
 0.909
Bccel_2229
6-deoxyerythronolide-B synthase, 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Acyl transferase, Beta-ketoacyl synthase, KR domain protein, acyl carrier protein familyprotein; KEGG: polyketide synthase family protein; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase/Fatty acid synthase, KR, Polyketide synthase, acyl transferase domain-containing protein.
  
 
 0.909
Bccel_2811
PFAM: DEAD/DEAH box helicase domain protein; KEGG: DEAD/DEAH box helicase.
  
 0.906
Bccel_2812
KEGG: DEAD/DEAH box helicase; PFAM: helicase domain-containing protein, DEAD/DEAH box helicase domain protein; SMART: helicase domain-containing protein.
  
 0.906
Bccel_3133
KEGG: DEAD/DEAH box helicase; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein; SMART: DEAD-like helicase, helicase domain-containing protein; Belongs to the DEAD box helicase family.
  
 0.906
Bccel_4105
KEGG: DNA/RNA helicase; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein, DbpA RNA-binding domain protein; SMART: DEAD-like helicase, helicase domain-containing protein; Belongs to the DEAD box helicase family.
  
 0.906
Bccel_5720
KEGG: DNA/RNA helicase; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein, DbpA RNA-binding domain protein; SMART: DEAD-like helicase, helicase domain-containing protein; Belongs to the DEAD box helicase family.
  
 0.906
Bccel_1449
CoA-disulfide reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, SirA-like domain-containing protein, Rhodanese-like protein, FAD-dependent pyridine nucleotide-disulfide oxidoreductase; KEGG: NAD(FAD)-dependent dehydrogenase; SMART: Rhodanese-like protein; Belongs to the sulfur carrier protein TusA family.
   
 0.883
Bccel_3905
KEGG: regulatory protein MerR.
   
 0.864
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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