STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_3711KEGG: methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein. (717 aa)    
Predicted Functional Partners:
Bccel_4834
KEGG: cheA2, chemotaxis protein histidine kinase CheA2; PFAM: response regulator receiver, Hpt domain protein, ATP-binding region ATPase domain protein, Signal transducing histidine kinase homodimeric, CheW domain protein; SMART: response regulator receiver, Hpt domain protein, CheW domain protein, ATP-binding region ATPase domain protein.
 
 0.982
Bccel_4610
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold-4 domain protein, PAS fold-3 domain protein, response regulator receiver, Hpt domain protein; KEGG: signal transduction histidine kinase-like protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAC repeat-containing protein, GAF domain protein, PAS domain containing protein, response regulator receiver.
  
 0.947
Bccel_1548
KEGG: CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein, CheW domain protein, Hpt domain protein, Signal transducing histidine kinase homodimeric; SMART: CheW domain protein, ATP-binding region ATPase domain protein, Hpt domain protein.
 
 0.942
Bccel_3633
CheA signal transduction histidine kinase; KEGG: chemotaxis protein histidine kinase-like protein; PFAM: CheW domain protein, ATP-binding region ATPase domain protein, Hpt domain protein, Signal transducing histidine kinase homodimeric, P2 response regulator binding domain protein; SMART: CheW domain protein, Hpt domain protein, ATP-binding region ATPase domain protein.
 
 0.942
Bccel_2564
Putative CheA signal transduction histidine kinase; KEGG: chemotaxis protein histidine kinase-like protein; PFAM: ATP-binding region ATPase domain protein, CheW domain protein, Signal transducing histidine kinase homodimeric; SMART: CheW domain protein, ATP-binding region ATPase domain protein.
 
 0.941
Bccel_3632
KEGG: CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein.
 
 0.941
Bccel_1213
KEGG: cheA, Signal transduction histidine kinase CheA; PFAM: ATP-binding region ATPase domain protein, CheW domain protein, Signal transducing histidine kinase homodimeric, P2 response regulator binding domain protein, Hpt domain protein; SMART: ATP-binding region ATPase domain protein, Hpt domain protein, CheW domain protein.
 
 0.940
Bccel_2311
KEGG: putative CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein.
 
 0.940
Bccel_0487
KEGG: CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein.
 
 0.939
Bccel_1553
Hpt protein; KEGG: cheA, chemotaxis protein CheA; PFAM: Hpt domain protein, P2 response regulator binding domain protein; SMART: Hpt domain protein.
 
 0.937
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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