STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_3791PFAM: OmpA/MotB domain protein, Motility protein B, N-terminal domain; KEGG: OmpA/MotB domain-containing protein. (251 aa)    
Predicted Functional Partners:
Bccel_3790
PFAM: MotA/TolQ/ExbB proton channel; KEGG: flagellar motor component.
 
 0.997
Bccel_0563
PFAM: MotA/TolQ/ExbB proton channel; KEGG: MotA/TolQ/ExbB proton channel.
 
 0.993
Bccel_1405
PFAM: MotA/TolQ/ExbB proton channel; KEGG: MotA/TolQ/ExbB proton channel.
 
 0.993
Bccel_3657
KEGG: flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG, C-terminal.
 
 
 0.943
Bccel_3660
KEGG: flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein, flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.938
Bccel_3645
CheC, phosphatase, inhibitor of MCP methylation; KEGG: flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein, CheC domain protein.
 
  
 0.927
Bccel_3661
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.921
Bccel_3658
KEGG: flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein, Flagellar M-ring domain protein.
 
  
 0.920
Bccel_3896
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.909
Bccel_3649
KEGG: flagellar hook-basal body protein; TIGRFAM: flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein, flagellar basal body FlaE domain protein, flagellar basal body rod protein.
 
  
 0.904
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.