STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_3847PFAM: Domain of unknown function DUF4366, Carbohydrate-binding CenC domain protein; KEGG: carbohydrate-binding CenC domain-containing protein. (281 aa)    
Predicted Functional Partners:
Bccel_3929
PFAM: glycosyl transferase family 39; KEGG: dolichyl-phosphate-mannose--protein O-mannosyl transferase.
 
      0.899
Bccel_3472
PFAM: Protein of unknown function DUF2029; KEGG: hypothetical protein.
 
      0.852
Bccel_3848
PFAM: amine oxidase; KEGG: amine oxidase.
       0.648
Bccel_3846
PFAM: Carbohydrate-binding CenC domain protein, Domain of unknown function DUF4366; KEGG: carbohydrate-binding CenC domain-containing protein.
      
0.532
mprF-2
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
       0.506
Bccel_3850
PFAM: coagulation factor 5/8 type domain protein; KEGG: hypothetical protein.
       0.462
Bccel_3851
KEGG: hypothetical protein.
       0.423
Bccel_3845
PFAM: glycosyl transferase family 2; KEGG: glycosyl transferase family protein.
       0.414
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.