Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_3883PFAM: FlgN family protein; KEGG: FlgN family protein. (169 aa)    
Predicted Functional Partners:
Bccel_3884
KEGG: flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS.
     
 0.817
Bccel_3885
Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
     
 0.669
Bccel_3886
PFAM: flagellar protein FlaG protein; KEGG: flagellar protein FlaG.
       0.636
Bccel_3882
KEGG: Ig domain-containing protein; PFAM: Ig domain protein group 2 domain protein, transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein, Ig domain protein group 2 domain protein.
       0.407
Bccel_3887
Glutamine--scyllo-inositol transaminase; KEGG: spore coat polysaccharide biosynthesis protein SpsC; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
       0.402
Bccel_3888
Radical SAM domain protein; KEGG: molybdopterin cofactor synthesis protein A; PFAM: Radical SAM domain protein, 4Fe4S-binding SPASM domain; SMART: Elongator protein 3/MiaB/NifB.
       0.402
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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