STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_3888Radical SAM domain protein; KEGG: molybdopterin cofactor synthesis protein A; PFAM: Radical SAM domain protein, 4Fe4S-binding SPASM domain; SMART: Elongator protein 3/MiaB/NifB. (346 aa)    
Predicted Functional Partners:
Bccel_3887
Glutamine--scyllo-inositol transaminase; KEGG: spore coat polysaccharide biosynthesis protein SpsC; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
    
 0.841
Bccel_3889
KEGG: putative N-acylneuraminate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase.
       0.691
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family.
  
 
  0.681
Bccel_3681
Molybdenum cofactor synthesis domain containing protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
  
 0.649
Bccel_0818
TIGRFAM: 4Fe4S-binding SPASM domain; PFAM: Radical SAM domain protein, Tetratricopeptide TPR_2 repeat-containing protein, 4Fe4S-binding SPASM domain; KEGG: radical SAM domain-containing protein; SMART: Elongator protein 3/MiaB/NifB.
  
  
  0.634
Bccel_1198
TIGRFAM: 4Fe4S-binding SPASM domain; PFAM: Radical SAM domain protein, 4Fe4S-binding SPASM domain, Tetratricopeptide TPR_2 repeat-containing protein; KEGG: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB.
  
  
  0.623
moaC
Molybdenum cofactor biosynthesis C, bacterial-type; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
  
  0.571
Bccel_3329
SMART: Transcription regulator, AsnC-type; KEGG: putative transcriptional regulator, AsnC family.
  
 
 0.538
Bccel_3885
Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
       0.528
Bccel_3886
PFAM: flagellar protein FlaG protein; KEGG: flagellar protein FlaG.
       0.528
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.