Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Bccel_4064Hypothetical protein; KEGG: cellulose 1,4-beta-cellobiosidase. (187 aa)    
Predicted Functional Partners:
Bccel_5538
KEGG: hypothetical protein.
  
     0.759
Bccel_3095
Alpha-N-arabinofuranosidase, Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10, glycoside hydrolase family 62, Carbohydrate binding family 6; KEGG: glycoside hydrolase; SMART: glycoside hydrolase family 10, cellulose binding type IV.
  
     0.751
Bccel_3093
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10, glycoside hydrolase family 11; KEGG: beta-1,4-xylanase; SMART: glycoside hydrolase family 10; Belongs to the glycosyl hydrolase 10 (cellulase F) family.
  
     0.750
Bccel_1632
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10, glycoside hydrolase family 11, Carbohydrate binding family 6; KEGG: beta-1,4-xylanase; SMART: glycoside hydrolase family 10, cellulose binding type IV; Belongs to the glycosyl hydrolase 10 (cellulase F) family.
  
     0.745
Bccel_3076
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10, Carbohydrate binding family 6, glycoside hydrolase family 11; KEGG: beta-1,4-xylanase; SMART: glycoside hydrolase family 10, cellulose binding type IV; Belongs to the glycosyl hydrolase 10 (cellulase F) family.
  
     0.745
Bccel_3814
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10, Carbohydrate binding family 6; KEGG: endo-1,4-beta-xylanase; SMART: cellulose binding type IV, glycoside hydrolase family 10.
  
     0.743
Bccel_5603
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10.
  
     0.741
Bccel_3096
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: xylanase B; SMART: glycoside hydrolase family 10.
  
     0.736
Bccel_3064
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10, S-layer domain-containing protein; KEGG: endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10.
  
     0.733
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.726
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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