Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_4065KEGG: KWG repeat-containing protein. (641 aa)    
Predicted Functional Partners:
Bccel_5128
SMART: AAA ATPase, CBS domain containing protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; KEGG: glycine betaine ABC transporter ATP-binding protein; PFAM: ABC transporter related protein, CBS domain containing protein.
  
 0.927
Bccel_5127
PFAM: ABC-type transporter, integral membrane subunit; KEGG: glycine betaine ABC transporter permease.
  
 
 0.802
Bccel_5897
PFAM: ABC-type transporter, integral membrane subunit; KEGG: glycine betaine ABC transporter permease.
  
 
 0.802
Bccel_4834
KEGG: cheA2, chemotaxis protein histidine kinase CheA2; PFAM: response regulator receiver, Hpt domain protein, ATP-binding region ATPase domain protein, Signal transducing histidine kinase homodimeric, CheW domain protein; SMART: response regulator receiver, Hpt domain protein, CheW domain protein, ATP-binding region ATPase domain protein.
     
  0.561
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
    0.462
Bccel_1210
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold-3 domain protein, response regulator receiver, PAS domain containing protein, histidine kinase A domain protein; KEGG: PAS domain-containing protein; SMART: ATP-binding region ATPase domain protein, PAC repeat-containing protein, response regulator receiver, histidine kinase A domain protein, PAS domain containing protein.
     
  0.441
Bccel_1545
KEGG: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein, PAS domain containing protein.
     
  0.441
Bccel_2559
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver, PAS domain containing protein; KEGG: signal transduction histidine kinase; SMART: response regulator receiver, ATP-binding region ATPase domain protein, PAS domain containing protein, histidine kinase A domain protein.
     
  0.441
Bccel_4610
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold-4 domain protein, PAS fold-3 domain protein, response regulator receiver, Hpt domain protein; KEGG: signal transduction histidine kinase-like protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAC repeat-containing protein, GAF domain protein, PAS domain containing protein, response regulator receiver.
     
  0.441
Bccel_5061
KEGG: multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, Hpt domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver.
     
  0.441
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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