STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_4122PFAM: Cupin 2 conserved barrel domain protein; KEGG: hypothetical protein. (196 aa)    
Predicted Functional Partners:
Bccel_1867
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
 
 0.857
Bccel_1010
Mannose-1-phosphate guanylyltransferase, Phosphoglucosamine mutase; KEGG: nucleotidyltransferase; PFAM: Nucleotidyl transferase, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, transferase hexapeptide repeat containing protein.
  
 
 0.781
Bccel_3822
PFAM: Nucleotidyl transferase; KEGG: Nucleoside-diphosphate-sugar pyrophosphorylase family protein.
  
 
 0.781
Bccel_3823
Phosphoglucosamine mutase; KEGG: nucleotidyltransferase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, transferase hexapeptide repeat containing protein.
  
 
 0.781
Bccel_1643
PFAM: sugar transferase; KEGG: UDP-galactose phosphate transferase.
 
 
 0.657
Bccel_2134
KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein, AraC protein arabinose-binding/dimerization; SMART: Helix-turn-helix, AraC domain-containing protein.
  
 0.630
Bccel_3303
KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein, AraC protein arabinose-binding/dimerization; SMART: Helix-turn-helix, AraC domain-containing protein.
  
 0.630
Bccel_2095
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
 
 0.613
Bccel_4914
Undecaprenyl-phosphate galactose phosphotransferase; KEGG: glycosyl-1-phosphate-transferase; PFAM: sugar transferase.
  
 
 0.613
Bccel_1504
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.577
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.