STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_4200KEGG: LytTR family two component transcriptional regulator; PFAM: LytTr DNA-binding region, response regulator receiver; SMART: LytTr DNA-binding region, response regulator receiver. (241 aa)    
Predicted Functional Partners:
Bccel_4201
KEGG: ATP-binding protein.
 
 
 0.992
Bccel_0617
Integral membrane sensor hybrid histidine kinase; KEGG: sensor protein; PFAM: response regulator receiver, ATP-binding region ATPase domain protein, histidine kinase A domain protein, Diverse 7TM receptor transmembrane region, histidine kinase internal region; SMART: response regulator receiver, histidine kinase A domain protein, ATP-binding region ATPase domain protein.
  
 0.943
Bccel_0342
Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; KEGG: histidine kinase.
 
 
 0.917
Bccel_5278
Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; KEGG: histidine kinase.
 
 
 0.911
Bccel_4203
Accessory protein regulator protein B; May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor; Belongs to the AgrB family.
 
  
 0.847
Bccel_0994
KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: histidine kinase internal region, histidine kinase HAMP region domain protein, ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein, ATP-binding region ATPase domain protein.
 
 
 0.711
Bccel_1728
KEGG: signal transduction histidine kinase, lyts; PFAM: histidine kinase internal region, ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein.
 
 
 0.693
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.693
Bccel_3080
KEGG: histidine kinase/HAMP domain/histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PFAM: histidine kinase internal region, ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.678
Bccel_3103
Integral membrane sensor signal transduction histidine kinase; KEGG: histidine kinase internal region; PFAM: histidine kinase internal region, ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein, ATP-binding region ATPase domain protein.
 
 
 0.668
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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