Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_4262KEGG: sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein. (478 aa)    
Predicted Functional Partners:
Bccel_4263
Two component transcriptional regulator, winged helix family; KEGG: transcriptional regulator; PFAM: transcriptional regulator domain-containing protein, response regulator receiver; SMART: response regulator receiver, transcriptional regulator domain-containing protein.
 
 0.977
Bccel_1081
Serine/threonine protein kinase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein, Tetratricopeptide repeat-containing protein, protein kinase; KEGG: hstK, serine/threonine kinase; SMART: GGDEF domain containing protein, serine/threonine protein kinase, Tetratricopeptide repeat-containing protein, GAF domain protein.
 
 
 0.946
Bccel_3352
Response regulator receiver protein; KEGG: winged helix family two component transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver.
 0.907
Bccel_5188
Two component transcriptional regulator, winged helix family; KEGG: response regulator receiver; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein.
 0.899
Bccel_5061
KEGG: multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, Hpt domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver.
 
0.897
Bccel_2335
Two component transcriptional regulator, winged helix family; KEGG: two-component signal transduction response regulator, CheY-like protein; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein.
 
 0.895
Bccel_1223
Two component transcriptional regulator, winged helix family; KEGG: response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein.
 
 0.894
Bccel_4862
KEGG: winged helix family two component transcriptional regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein.
 
 0.894
Bccel_5324
Two component transcriptional regulator, winged helix family; KEGG: two component transcriptional regulator; PFAM: transcriptional regulator domain-containing protein, response regulator receiver; SMART: response regulator receiver, transcriptional regulator domain-containing protein.
 
 0.890
Bccel_4828
KEGG: response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 0.889
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.