Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Bccel_4313KEGG: hypothetical protein. (255 aa)    
Predicted Functional Partners:
Bccel_3316
Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
 0.999
Bccel_4312
PFAM: Domain of unknown function DUF4314; KEGG: hypothetical protein.
 
    0.859
Bccel_4331
KEGG: HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease.
 
  
  0.852
Bccel_4311
PFAM: Terminase; KEGG: terminase.
 
     0.841
Bccel_1449
CoA-disulfide reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, SirA-like domain-containing protein, Rhodanese-like protein, FAD-dependent pyridine nucleotide-disulfide oxidoreductase; KEGG: NAD(FAD)-dependent dehydrogenase; SMART: Rhodanese-like protein; Belongs to the sulfur carrier protein TusA family.
  
 
 0.827
Bccel_3320
KEGG: sulfate ABC transporter permease; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW, sulfate ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit.
  
 
 0.813
Bccel_4329
KEGG: hypothetical protein.
 
    0.813
Bccel_3322
TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; KEGG: sulfate ABC transporter substrate-binding protein.
  
 
 0.810
Bccel_4325
KEGG: DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6 domain protein, ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.804
Bccel_4327
KEGG: DNA methylase; PFAM: DNA methylase N-4/N-6 domain protein, ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.795
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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