Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_4433KEGG: ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase. (323 aa)    
Predicted Functional Partners:
Bccel_4434
PFAM: protein of unknown function DUF58; KEGG: hypothetical protein.
 
  
 0.889
Bccel_1535
KEGG: transglutaminase; PFAM: transglutaminase domain-containing protein, Domain of unknown function DUF4129; SMART: transglutaminase domain-containing protein.
 
   
 0.733
Bccel_5047
KEGG: transglutaminase; PFAM: transglutaminase domain-containing protein, Domain of unknown function DUF4129; SMART: transglutaminase domain-containing protein.
 
   
 0.683
Bccel_4435
Hypothetical protein.
       0.648
Bccel_1533
PFAM: protein of unknown function DUF58; KEGG: hypothetical protein.
 
  
 0.601
Bccel_4432
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase-like protein.
       0.548
Bccel_1063
PFAM: protein of unknown function DUF58; KEGG: hypothetical protein.
 
  
 0.528
Bccel_2434
KEGG: arginine/lysine/ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region, Orn/Lys/Arg decarboxylase domain protein.
    
 
 0.523
Bccel_4428
KEGG: arginine/lysine/ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region, Orn/Lys/Arg decarboxylase domain protein.
    
 
 0.523
Bccel_0056
KEGG: hypothetical protein.
    
 0.447
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.