Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Bccel_4451PFAM: Glyoxalase-like domain; KEGG: lactoylglutathione lyase. (122 aa)    
Predicted Functional Partners:
Bccel_3959
SMART: Chorismate mutase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; PFAM: DAHP synthetase I/KDSA, Chorismate mutase, type II.
    
  0.738
Bccel_1731
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: yyaH, glyoxalase family protein.
    
 0.698
Bccel_1713
Hypothetical protein; KEGG: glyoxalase.
  
 
 0.690
Bccel_4709
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: glyoxalase/bleomycin resistance protein/dioxygenase.
    
 0.674
Bccel_4531
KEGG: L-amino-acid oxidase; PFAM: amine oxidase.
     
  0.672
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
  0.560
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
  0.560
Bccel_1449
CoA-disulfide reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, SirA-like domain-containing protein, Rhodanese-like protein, FAD-dependent pyridine nucleotide-disulfide oxidoreductase; KEGG: NAD(FAD)-dependent dehydrogenase; SMART: Rhodanese-like protein; Belongs to the sulfur carrier protein TusA family.
  
 
 0.545
Bccel_1178
KEGG: Zn-dependent hydrolase; PFAM: beta-lactamase domain protein; SMART: beta-lactamase domain protein.
    
  0.506
Bccel_3232
KEGG: Zn-dependent hydrolase; PFAM: beta-lactamase domain protein; SMART: beta-lactamase domain protein.
    
  0.506
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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