STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_4468KEGG: cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (289 aa)    
Predicted Functional Partners:
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
    0.691
ldh-2
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
    0.691
Bccel_2600
KEGG: flagellar hook-basal body protein; TIGRFAM: flagellar basal-body rod protein FlgG, flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein, flagellar basal body rod protein.
    
 
 0.622
Bccel_4660
TIGRFAM: heavy metal translocating P-type ATPase, ATPase, P-type (transporting), HAD superfamily, subfamily IC, cadmium-translocating P-type ATPase; KEGG: cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein, Haloacid dehalogenase domain protein hydrolase, Heavy metal transport/detoxification protein.
 
 
 0.593
Bccel_3236
KEGG: FeoA family protein; PFAM: FeoA family protein; SMART: FeoA family protein.
 
   
 0.554
Bccel_2601
KEGG: flagellar hook-basal body protein; TIGRFAM: flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein, flagellar basal body rod protein.
    
 
 0.552
Bccel_3235
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
 
   
 0.461
Bccel_4751
KEGG: beta-lactamase; PFAM: beta-lactamase domain protein; SMART: beta-lactamase domain protein.
  
 
  0.451
Bccel_3237
KEGG: iron dependent repressor; PFAM: iron dependent repressor, Iron dependent repressor, N-terminal; SMART: Iron dependent repressor, diptheria toxin type.
     
 0.450
cmk
TIGRFAM: cytidylate kinase; HAMAP : Cytidylate kinase; KEGG: cytidylate kinase; PFAM: cytidylate kinase region.
  
    0.418
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.